Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912641.1_cds_XP_016462730.1_55926
CDS Infomation

[gene=LOC107785854] [db_xref=GeneID:107785854] [protein=zinc finger CCCH domain-containing protein 43-like isoform X2] [protein_id=XP_016462730.1] [location=complement(join(2906..3100,3432..3704,4163..4438,4515..4634,6804..7337))] [gbkey=CDS]
Sequence

ATGAAAGCCATTGAATCACAACAACGCATTCAAAATCTAAATGACTCTACACTTGAAAAA
CAAGACGTAGGGCTTGATCCTCAACCTTTGTTTTCATCGGATCCCAGTGTTCAAAACCCT
CCTCAGAATCTACCTGACGCTGTGGAAAACGACGATGACGATGAGATAGCGTTGCAATTC
ATCTGCAAAGAGCTTCAGGGTCTAGTCTTGAACCAGGCTTATATCGAAGAGAGATCACAA
GGAGAAAATCATGAAGAGAATGGAAGAGAAAAATCTGAAAATGAGTGCGGAGATAATTAT
TATGGAGGTGGTGACTATACTTGGAGTGAAAATGGATATGAAAATGAGAACGACGTGGAA
AATGAGAACAGTGATGTGACGGGCTCGAAGCAATGGGGATTTAAGGGGAATAGGAAGGGG
TTGAATTACCCGTTGAGACCCGATGCTGCAGATTGTGCTTATTATATGAAAACAGGGACG
TGTAAATACGGATTGAATTGCAAGTTTAATCACCCTTCCCGAAGACGAAATCAGTATTAC
CTGACAGAAGGAGGGTGCAAGTATGGAAATACCTGTAAATATTATCATAGTAGGAGAAAG
GGTGCGATCTCACCTGTTCTGAATATTAACTTTCTTGGCCTTCCAATTCGGCCGGGAGAG
AAGGATTGCCCCTACTATATGCGCACTGGCTCCTGCAAGTATGGATCCAATTGCAGGTTT
CATCATCCTGATCCATCTACAGTGGCTGGAGGTGATCCTTCTTCCGGATACAACAACGGT
GGATCTGCTCCAGTAAAAAGTGCTCCCTACCCAGCAGGGTCTTCCTGGTCTTCGCCAAGA
GCATTGAATGAGACAGCTTCTTTTGTACCAGTGGTATATCCAGCAAGTCAAGGCATTCCT
CTTCTAAGTCCTCAATGGAATGGATATCTGGCCCCAGTCTATCCAACCTCAGGGAAGAGC
CTCCCTACACCTCCAGAATTTATAAGAAAGGATCCAGCAACTAAGACAAACTTCTATACC
CGAGCTCAACAGCCATGGCTTGTTGAAGAATACCCTGAACGGCCAGGTCAACCTGATTGC
AGTTACTTTATTAAAACAGGAGACTGTAAATATAGATCTAACTGCAAATTTCACCATCGA
AAGAATCAAACATCTAAGACAAACATGAGTGCTCTCAATGACAAGGGCCTGCCACTAAGA
CCTGATCAAGCTGTCTGTTCATTCTACAGCCGTTATGGGATTTGCAAGTTTGGACCTGCT
TGTAAGTTTGGCCATCCAGAACATTATGACAACTCAGCTTCTTCTATTGGGTCTGTCTTT
GATCAGCCTCCATTCGGCAACTCTGCTACCTCATATGGCTCTAGGTGGCGAGGAAAGGAA
ACGGAAGTGGCTCTCTAA

Peptide Sequence

PEP ID

XP_016462730.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 43-like isoform X2 [Nicotiana tabacum]
Sequence

MKAIESQQRIQNLNDSTLEKQDVGLDPQPLFSSDPSVQNPPQNLPDAVENDDDDEIALQF
ICKELQGLVLNQAYIEERSQGENHEENGREKSENECGDNYYGGGDYTWSENGYENENDVE
NENSDVTGSKQWGFKGNRKGLNYPLRPDAADCAYYMKTGTCKYGLNCKFNHPSRRRNQYY
LTEGGCKYGNTCKYYHSRRKGAISPVLNINFLGLPIRPGEKDCPYYMRTGSCKYGSNCRF
HHPDPSTVAGGDPSSGYNNGGSAPVKSAPYPAGSSWSSPRALNETASFVPVVYPASQGIP
LLSPQWNGYLAPVYPTSGKSLPTPPEFIRKDPATKTNFYTRAQQPWLVEEYPERPGQPDC
SYFIKTGDCKYRSNCKFHHRKNQTSKTNMSALNDKGLPLRPDQAVCSFYSRYGICKFGPA
CKFGHPEHYDNSASSIGSVFDQPPFGNSATSYGSRWRGKETEVAL

Transcript Sequence

Gene sequence data has not been registered.